KEMRI-Wellcome Assistant Research Officer Jobs in Kilifi - Kenya

KEMRI-Wellcome Assistant Research Officer Jobs in Kilifi - Kenya


Job Purpose

To undertake sequencing and bioinformatics analysis for a project aimed at understanding the transmission pathways of respiratory viruses in Kenya.

Viruses under investigation include rhinovirus, respiratory syncytial virus, influenza, coronavirus, and human metapneumovirus.

Description:

Reports to:

  • Bioinformatics lead.

    Direct Reports:

  • None

    Indirect Reports

  • None

    Budget Responsibilitiy:

  • None

    Key Responsibilities:

  • Implementing, optimizing and troubleshooting viral pathogen sequencing protocols
  • Developing a multi-species whole genome sequencing method for rhinovirus to investigate sequences in large archive of respiratory samples
    Molecular diagnostic screening for a range of virus targets in archived and ongoing respiratory samples collections
  • Assembling viral sequence contigs from the raw sequencing reads derived from next generation sequencers
  • Performing phylogenetic analyses, producing reports and presenting arising results
  • Contributing to scientific manuscripts and other dissemination activities

    Qualifications

  • BSc in Medical Laboratory Science and Technology, Molecular Biology Bioinformatics, or similar (Upper second honors or higher)
  • At least 1 year experience in virus molecular diagnostics
  • Experience in virus whole genome sequencing using Sanger and NGS methods
  • Previous experience in rhinovirus typing and sequencing
  • Capability in bioinformatics and phylogenetic analysis of sequence data

    Desirable

  • Undertaken a Post-Graduate Diploma in relevant subject area
  • Knowledge and capability in programming for sequence data manipulations (e.g. R, python)
  • A one-year research experience and evidence of scientific publication/contribution

    Skills and Competence

  • Understanding of virus sequencing including NGS and phylogenetics
  • The ability to plan own workload and keep accurate scientific records.
  • Excellent communication and interpersonal skills
  • Ability to organize work to changing priorities is essential

    Relationships:

  • Working in collaboration with members of the Viral Epidemiology
    and Control (VEC) group (laboratory and research), and with relevant Programme scientists such as those linked to Kilifi Bioinformatics Core (KBiC).

    How to apply

    Application Procedure:

  • To apply for this post you must be a registered user. Log into your account then go to Vacancies, view the post and click on the button: "Apply for this job".
  • All applicants are required to state their current/last salary.
  • Candidates must supply an email and telephone contact that will be used when offering interviews. Only shortlisted candidates will be contacted.
  • Shortlisted candidates shall be required to produce ORIGINALS of their National Identity Card, academic and professional certificates, original transcripts and testimonials, detailed curriculum vitae and valid clearance certificate (certificate of good conduct) during the interviews. The application closing date is 21st September, 2018.
  • KEMRI-Wellcome Trust Research Programme (KWTRP) is an equal opportunity employer. Direct or indirect canvassing will lead to automatic disqualification.
  • KWTRP does not charge a fee at any stage of the recruitment process (application, interview, meeting, processing, training or any other fees).

  • For more information and job application details, see; KEMRI-Wellcome Assistant Research Officer Jobs in Kilifi - Kenya

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